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Abstract Double-strand breaks (DSBs) in DNA are challenging to repair. Cells employ at least three DSB-repair mechanisms, with a preference for non-homologous end joining (NHEJ) over homologous recombination (HR) and microhomology-mediated end joining (MMEJ). While most eukaryotic DNA is transcribed into RNA, providing complementary genetic information, much remains unknown about the direct impact of RNA on DSB-repair outcomes and its role in DSB-repair via end joining. Here, we show that both sense and antisense-transcript RNAs impact DSB repair in a sequence-specific manner in wild-type human and yeast cells. Depending on its sequence complementarity with the broken DNA ends, a transcript RNA can promote repair of a DSB or a double-strand gap in its DNA gene via NHEJ or MMEJ, independently from DNA synthesis. The results demonstrate a role of transcript RNA in directing the way DSBs are repaired in DNA, suggesting that RNA may directly modulate genome stability and evolution.more » « lessFree, publicly-accessible full text available December 1, 2025
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Medri, Jhonatan; Channagiri, Tejasvi; Lu, Lu (, Journal of Data Science)Racial and ethnic representation in home ownership rates is an important public policy topic for addressing inequality within society. Although more than half of the households in the US are owned, rather than rented, the representation of home ownership is unequal among different racial and ethnic groups. Here we analyze the US Census Bureau’s American Community Survey data to conduct an exploratory and statistical analysis of home ownership in the US, and find sociodemographic factors that are associated with differences in home ownership rates. We use binomial and beta-binomial generalized linear models (GLMs) with 2020 county-level data to model the home ownership rate, and fit the beta-binomial models with Bayesian estimation. We determine that race/ethnic group, geographic region, and income all have significant associations with the home ownership rate. To make the data and results accessible to the public, we develop an Shiny web application in R with exploratory plots and model predictions.more » « less
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